BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C06LP1|AL426180
(775 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig485 240 3e-63
>3x_Contig485
Length = 1328
Score = 240 bits (121), Expect = 3e-63
Identities = 143/149 (95%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 1 ctgatctatctggagatataactgcattttcgttggagt-atcaatgggaagatcaaaga 59
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1176 ctgatctatctggagatataactgcattttcgttggagtcatcaatgggaagatcaaaga 1235
Query: 60 atgtaccgccgaaatctgaagagtcttcgaatttcgtggtagccgcttgttgttcctgtt 119
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1236 atgtaccgccgaaatctgaagagtcttcgaatttcgtggtagccgcttgtcgttcctgtt 1295
Query: 120 ggactttcttttgcatttcaacggattgt 148
||||||||||| || ||||| ||| ||||
Sbjct: 1296 ggactttctttcgcctttcaccggtttgt 1324
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6590
Number of Sequences: 1807
Number of extensions: 6590
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 775
length of database: 10,358,551
effective HSP length: 16
effective length of query: 759
effective length of database: 10,329,639
effective search space: 7840196001
effective search space used: 7840196001
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)